| Date |
Event |
Author |
Title |
Abstract |
| 2007-12-15 |
Online |
Michael Cariaso |
Introducing the WikiLIMS. [Video Screencast] |
A video screencast providing an 18 minute guided tour of WikiLIMS |
| 2007-10-02 |
Harvard BioMed HPC Leadership Summit 2007 |
Chris Dagdigian |
Trends from the Trenches. [PDF] |
Hype-free discussion of observed BioIT trends and challenges |
| 2007-10-01 |
Greythumb |
Chris Dwan |
Bioinformatics [PDF, Google Video ] |
A very informal talk on HPC and bioinformatics, for the Cambridge artificial life club. |
| 2007-07-27 |
ISMB 2007 |
Bill Van Etten |
Workgroup
Server for Bioinformatics [PDF] |
A demonstration of a shared iNquiry server
on a single 8 core system as an alternative to clustering |
| 2007-07-27 |
ISMB 2007 |
Bill Van Etten |
Workgroup
Server for Next-Gen Sequencing [PDF] |
An introduction to Next-Generation
sequencing and the use of a single 8 core system plus RAID array as an
alternative to a cluster |
| 2007-09-11 |
3rd Sun Grid Engine Workshop |
Chris Dagdigian |
Fun with Grid Engine XML. [PDF] |
A short talk on the technology and techniques behind the xml-qstat software |
| 2007-09-11 |
3rd Sun Grid Engine Workshop |
Chris Dagdigian |
SGE vs. LSF [PDF] |
A non-technical talk for the SGE project leaders explaining why I chose Platform LSF on a recent project |
| 2007-04-02 |
2007 Bio-IT-World Expo |
Chris Dwan |
Four Technologies that Matter for Bioinformatics: 2007 [PDF] |
An overview of the technologies that will shape 2007 and beyond in Bioinformatics |
| 2006-04-02 |
2006 Bio IT World Expo |
Chris Dwan |
Web Services for Bioinformatics [PDF] |
Programmatic interfaces to the inquiry tools |
| 2005-12-02 |
Lecture to the 6th grade class of Rupert Nock Middle School, Newburyport, MA |
Bill Van Etten |
Genetics of Evolution [PDF] |
A high-level view of evolution from the perspective of genetics. |
| 2004-11-18 |
LISA '04 Plenary Address |
Bill Van Etten |
A System Administrator's Introduction to Bioinformatics [PDF] |
An introduction to genetics and bioinformatics algorithms tailored for the UNIX system administrator. |
| 2004-12-01 |
New England Seminar Series (MIT, UConn, Rockefeller, Princeton, UBuffalo, Cornell, Penn State, Rutgers) |
Bill Van Etten |
Mac OS X Clustering for Informatics. [PDF] |
Exploring the building, administration and use of clusters for the performance of scientific research. |
| 2003-02-04 |
O'Reilly Bioinformatics Technology Conference |
Chris Dagdigian |
Architecting, Building and Managing Production Bioclusters. [HTML] [PDF] [PPT.gz] |
Back by popular demand, Chris delivers a 90 minute "Building Bioclusters" talk |
| 2003-02-03 |
O'Reilly Bioinformatics Technology Conference |
Chris Dwan |
How not to use BLAST [PDF] |
A half hour summary of uses of BLAST that didn't make any sense. |
| 2002-01-03 |
O'Reilly Bioinformatics Technology Conference |
Chris Dagdigian |
Building Production Grade Linux Clusters For Life Science Informatics. [HTML] [PPT.gz]
|
Lessons learned from building clusters and compute farms optimized for life science informatics |
